Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mbdA3-methylbenzoate-CoA ligase. (526 aa)    
Predicted Functional Partners:
boxC
Benzoyl-CoA-dihydrodiol lyase.
 
 
 0.722
boxB
Benzoyl-CoA oxygenase component B.
 
   
 0.697
boxR
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
 
 0.599
bzdR
BzdR; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
 
 0.595
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.526
AKU14385.1
Putative 3-methylbenzoate transporter ATPase.
 
     0.518
boxA
Benzoyl-CoA oxygenase component A.
  
   
 0.494
AKU14381.1
Putative 3-methylbenzoate transporter periplasmic subunit.
 
     0.484
bzdT
BzdT.
 
  
 0.477
AKU14504.1
BzdT protein.
 
  
 0.470
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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