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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bssABenzylsuccinate synthase alpha subunit. (864 aa)    
Predicted Functional Partners:
bssB
Beta subunit of benzylsuccinate synthase.
   
 0.995
bssD
BssD.
 
  
 0.994
AKU14391.1
Benzylsuccinate synthase gamma subunit.
   
 0.993
bbsE
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE; Belongs to the CoA-transferase III family.
  
  
 0.923
AKU14408.1
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF; Belongs to the CoA-transferase III family.
  
  
 0.919
AKU14394.1
BssE.
 
   
 0.851
bssG
BssG.
 
     0.847
AKU14399.1
BssI.
 
     0.829
AKU11958.1
Pyruvate formate-lyase activating enzyme.
  
  
 0.828
bssJ
BssJ.
 
   
 0.820
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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