Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bssJBssJ. (307 aa)    
Predicted Functional Partners:
bssG
BssG.
   
 0.976
AKU14399.1
BssI.
 
   
 0.945
bssK
BssK.
 
 
 0.892
AKU14394.1
BssE.
 
   
 0.880
bssA
Benzylsuccinate synthase alpha subunit.
 
     0.817
AKU14402.1
BssL.
 
     0.807
AKU14397.1
MoaD family protein.
 
     0.799
AKU14398.1
Hypothetical protein.
       0.774
AKU14395.1
BssF.
     
 0.769
bbsA
BbsA.
  
   
 0.693
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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