Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bbsHBbsH; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)    
Predicted Functional Partners:
bbsG
(R)-benzylsuccinyl-CoA dehydrogenase.
 
 0.981
bbsD
BbsD.
  
  0.941
bbsC
BbsC.
  
  0.940
AKU12948.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.908
AKU12329.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
 0.860
AKU14373.1
Putative hydroxyacyl-CoA dehydrogenase.
 0.849
bbsB
BbsB; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.719
bbsI
BbsI.
  
   0.667
AKU10240.1
3-hydroxyadipyl-CoA dehydrogenase PaaH.
 0.604
AKU10334.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.586
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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