Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bbsCBbsC. (250 aa)    
Predicted Functional Partners:
bbsD
BbsD.
 
 
 
0.982
bbsB
BbsB; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.979
bbsA
BbsA.
 
 
  0.977
bbsH
BbsH; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.940
AKU11367.1
Short-chain dehydrogenase of unknown substrate specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.843
AKU11362.1
3-beta-hydroxysteroid dehydrogenase.
  
 
   0.817
AKU14306.1
TodD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.809
AKU10916.1
AMP-dependent synthetase and ligase.
  
 0.800
AKU14237.1
NAD-dependent epimerase/dehydratase.
  
     0.774
AKU10322.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.767
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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