Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bbsABbsA. (144 aa)    
Predicted Functional Partners:
bbsB
BbsB; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.996
bbsC
BbsC.
 
 
  0.977
bbsD
BbsD.
   
  0.972
bbsE
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE; Belongs to the CoA-transferase III family.
 
  
  0.969
AKU14408.1
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF; Belongs to the CoA-transferase III family.
 
  
  0.963
AKU12407.1
Hypothetical protein.
  
 
 0.883
bssG
BssG.
  
   
 0.786
AKU14399.1
BssI.
  
   
 0.784
AKU11440.1
propanoyl-CoA C-acyltransferase.
 
 
 0.758
bssA
Benzylsuccinate synthase alpha subunit.
  
   
 0.757
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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