Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14429.1Hypothetical protein. (757 aa)    
Predicted Functional Partners:
AKU14431.1
Hypothetical protein.
   
 0.866
AKU14430.1
Hypothetical protein.
 
     0.855
AKU10038.1
ATP-dependent DNA helicase, RecQ family.
  
 0.845
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.826
AKU12502.1
Hypothetical protein.
   
 0.808
AKU14448.1
DNA topoisomerase III.
 
 
 0.808
AKU14449.1
ssDNA-binding protein.
 
 
 
 0.801
AKU12450.1
Single-stranded DNA-binding protein.
 
 
 
 0.797
AKU14425.1
Integrating conjugative element protein, PFL_4693 family.
 
 
 0.793
AKU12457.1
Hypothetical protein.
 
  
 0.784
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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