Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14436.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
AKU12385.1
Type iv secretory pathway vird2 (relaxase)-related protein.
  
     0.751
AKU14437.1
Hypothetical protein.
       0.575
AKU14438.1
Hypothetical protein.
 
     0.562
AKU14290.1
LysR family transcriptional regulator.
  
     0.514
AKU13342.1
Na+/H+ antiporter.
  
     0.456
AKU14433.1
Patatin.
     
 0.452
AKU14434.1
hesA/moeB/thiF type protein.
       0.447
AKU14435.1
Hypothetical protein.
       0.447
AKU14458.1
Phage transcriptional regulator, AlpA.
 
  
 0.430
AKU14289.1
Integrase family protein; Belongs to the 'phage' integrase family.
  
     0.421
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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