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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14449.1ssDNA-binding protein. (127 aa)    
Predicted Functional Partners:
AKU14448.1
DNA topoisomerase III.
 
 
 0.987
AKU12450.1
Single-stranded DNA-binding protein.
  
  
 
0.924
AKU13900.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
     
  0.900
AKU14451.1
Hypothetical protein.
 
     0.883
AKU14455.1
Hypothetical protein.
 
   
 0.831
AKU14453.1
Hypothetical protein.
 
   
 0.823
AKU14454.1
Hypothetical protein.
 
     0.820
AKU14457.1
Chromosome partitioning protein.
 
   
 0.818
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.804
AKU14458.1
Phage transcriptional regulator, AlpA.
 
  
 0.803
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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