Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14458.1Phage transcriptional regulator, AlpA. (71 aa)    
Predicted Functional Partners:
AKU14454.1
Hypothetical protein.
 
     0.909
AKU14455.1
Hypothetical protein.
 
   
 0.909
AKU14453.1
Hypothetical protein.
 
     0.908
AKU14457.1
Chromosome partitioning protein.
 
     0.892
AKU14449.1
ssDNA-binding protein.
 
  
 0.800
AKU14451.1
Hypothetical protein.
 
     0.791
AKU14336.1
Hypothetical protein.
 
   
 0.751
AKU14353.1
Hypothetical protein.
  
     0.750
AKU14289.1
Integrase family protein; Belongs to the 'phage' integrase family.
 
  
 0.741
AKU14342.1
Hypothetical protein.
 
    0.739
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.