Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14466.1Hypothetical protein. (1110 aa)    
Predicted Functional Partners:
AKU14465.1
Leucine-binding protein (LBP) precursor.
       0.650
AKU14463.1
ATP-dependent protease La, LON domain-containing protein.
       0.588
ubiX-2
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.579
AKU12240.1
Complex sensory protein.
 
 
0.527
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
 
 
 0.501
tol
Tol.
 
 
0.497
AKU11211.1
Hypothetical protein.
 
 
 0.484
AKU10597.1
Putative hybrid sensor and regulator.
 
 
 0.483
AKU10764.1
Hypothetical protein.
 
 
0.466
AKU13461.1
Flagellar-like protein.
  
 
 0.464
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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