Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU14500.1C4-dicarboxylate uptake permease. (443 aa)    
Predicted Functional Partners:
AKU14499.1
Dicarboxylate transport protein.
 
 
 0.995
AKU14501.1
Hypothetical protein.
 
 0.978
AKU13357.1
TRAP-T family transporter, periplasmic ligand binding protein, DctQ.
 
 0.895
AKU13647.1
C4-dicarboxylate-binding periplasmic protein.
 
 
 0.893
AKU13358.1
TRAP-T family transporter, DctP subunit.
 
 
 0.889
AKU13646.1
C4-dicarboxylate transport system permease, small subunit.
 
 0.869
AKU14502.1
acyl-CoA dehydrogenase.
  
 
 0.607
AKU10794.1
Exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.564
AKU10795.1
Exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.528
AKU14498.1
3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase.
       0.487
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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