Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14509.1Rubredoxin-type Fe(Cys)4 protein; Belongs to the rubredoxin family. (57 aa)    
Predicted Functional Partners:
AKU10646.1
Nitrite reductase.
  
 
 0.762
AKU12636.1
Ferredoxin protein.
  
 
 0.762
AKU14308.1
TodB.
  
 
 0.762
AKU10977.1
Nitric oxide dioxygenase; Belongs to the globin family.
  
  
 0.716
AKU12092.1
Rubrerythrin/nigerythrin-like protein.
 
  
 0.707
AKU11949.1
Flavodoxin protein.
  
  
 0.701
AKU12094.1
Rubredoxin reductase.
 
 
 0.670
AKU12076.1
Nitrate reductase 1, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.646
AKU14053.1
Glutamate synthase.
  
  
 0.630
AKU10598.1
Nitrogenase molybdenum-iron cofactor biosynthesis protein.
  
 
 0.628
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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