Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU14518.1Benzoate--CoA ligase. (587 aa)    
Predicted Functional Partners:
AKU10311.1
4-hydroxybenzoyl-CoA reductase, beta subunit.
 
 
  0.921
AKU10312.1
4-hydroxybenzoyl-CoA reductase subunit alpha.
  
 
 0.905
AKU13094.1
Acylphosphatase.
     
 0.902
AKU10313.1
4-hydroxybenzoyl-CoA reductase, gamma subunit.
    
  0.901
bzdA
Benzoate--CoA ligase.
  
  
 
0.901
AKU14519.1
Hypothetical protein.
 
     0.862
boxC
Benzoyl-CoA-dihydrodiol lyase.
 
 
 0.833
boxB
Benzoyl-CoA oxygenase component B.
 
   
 0.809
boxR
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
 
 0.798
bzdR
BzdR; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
 
 0.741
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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