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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
boxCBenzoyl-CoA-dihydrodiol lyase. (555 aa)    
Predicted Functional Partners:
boxB
Benzoyl-CoA oxygenase component B.
 
 
 0.996
boxA
Benzoyl-CoA oxygenase component A.
 
 
 0.995
boxD
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase.
 
 0.983
boxR
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.929
AKU14512.1
Putative lactonase.
 
 0.861
AKU14518.1
Benzoate--CoA ligase.
 
 
 0.846
AKU14519.1
Hypothetical protein.
 
     0.838
thiolase
Putative thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.821
bzdA
Benzoate--CoA ligase.
 
 
 0.803
AKU12426.1
Putative acyl-CoA dehydrogenase.
 
  0.800
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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