Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
boxBBenzoyl-CoA oxygenase component B. (473 aa)    
Predicted Functional Partners:
boxC
Benzoyl-CoA-dihydrodiol lyase.
 
 
 0.994
boxA
Benzoyl-CoA oxygenase component A.
 
  
 0.993
AKU10311.1
4-hydroxybenzoyl-CoA reductase, beta subunit.
  
  
  0.917
AKU10312.1
4-hydroxybenzoyl-CoA reductase subunit alpha.
     
  0.900
AKU10313.1
4-hydroxybenzoyl-CoA reductase, gamma subunit.
     
  0.900
boxR
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.897
AKU14519.1
Hypothetical protein.
 
     0.826
AKU10244.1
phenylacetate-CoA oxygenase subunit PaaB.
  
 0.823
AKU14518.1
Benzoate--CoA ligase.
 
   
 0.809
AKU10247.1
Ring-hydroxylation complex protein 4.
  
 0.806
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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