Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14544.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
AKU14543.1
Hypothetical protein.
       0.799
AKU14545.1
Putative tail sheath protein.
       0.704
AKU14547.1
Hypothetical protein.
       0.652
AKU14546.1
Putative phage tail protein.
       0.630
AKU14548.1
Hypothetical protein.
       0.630
AKU14549.1
Hypothetical protein.
       0.614
AKU14550.1
Hypothetical protein.
       0.614
AKU14551.1
Hypothetical protein.
       0.551
AKU14553.1
Hypothetical protein.
       0.550
AKU14552.1
Hypothetical protein.
       0.547
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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