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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14598.1Hypothetical protein. (505 aa)    
Predicted Functional Partners:
AKU14599.1
Hypothetical protein.
 
  
 0.980
AKU14600.1
Hypothetical protein.
 
  
 0.974
AKU14601.1
Hypothetical protein.
 
  
 0.949
AKU12018.1
Hypothetical protein.
  
  
 
0.905
AKU12014.1
Hypothetical protein.
  
 0.897
AKU12013.1
Hypothetical protein.
 
  
 0.891
AKU12022.1
Hypothetical protein.
 
  
 0.891
AKU12019.1
Hypothetical protein.
 
  
 0.833
AKU14597.1
Putative universal stress protein f.
       0.763
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.477
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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