Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14601.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
AKU14600.1
Hypothetical protein.
 
  
 
0.955
AKU14598.1
Hypothetical protein.
 
  
 0.954
AKU14599.1
Hypothetical protein.
 
  
 0.943
AKU12018.1
Hypothetical protein.
 
  
 0.902
AKU12019.1
Hypothetical protein.
 
  
 0.725
AKU14597.1
Putative universal stress protein f.
       0.551
AKU14602.1
Two-component system, OmpR family, sensor histidine kinase.
     
 0.462
AKU14604.1
Extracellular solute-binding protein family 1.
 
     0.421
AKU14603.1
Two-component system, OmpR family, response regulator.
       0.407
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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