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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14602.1Two-component system, OmpR family, sensor histidine kinase. (469 aa)    
Predicted Functional Partners:
AKU14603.1
Two-component system, OmpR family, response regulator.
 
 0.995
AKU10681.1
Two-component system, OmpR family, sensor histidine kinase.
  
  
 
0.915
AKU14604.1
Extracellular solute-binding protein family 1.
     0.901
AKU10680.1
Two-component system, OmpR family, response regulator.
 
 
 0.868
AKU13386.1
Two-component transcriptional regulator.
 
 
 0.840
AKU10228.1
Functional role page for TorCAD operon transcriptional regulatory protein TorR.
 
 
 0.807
AKU13184.1
Two-component system, OmpR family, response regulator.
 
 
 0.801
AKU10031.1
PAS domain S-box.
 
 
 0.792
AKU11233.1
Response regulator receiver protein.
 
 
 0.784
AKU13976.1
DNA-binding response regulator.
 
 
 0.782
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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