Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU14607.1Ribonuclease BN. (299 aa)    
Predicted Functional Partners:
AKU12611.1
Hypothetical protein.
  
     0.557
AKU11443.1
Hypothetical protein.
  
     0.521
AKU10045.1
Hypothetical protein.
  
     0.509
AKU12128.1
Na+/H+ antiporter.
 
   
 0.498
AKU12203.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.485
AKU11152.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.454
AKU12610.1
Type I secretion protein.
 
   
 0.452
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
 
  
 0.447
AKU12609.1
Putative prolyl cis-trans isomerase.
  
   
 0.446
AKU11660.1
Phosphoesterase, PA-phosphatase related protein.
 
   
 0.440
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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