Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU14618.1Putative transcriptional regulator. (676 aa)    
Predicted Functional Partners:
AKU14277.1
Transcriptional regulator.
  
  
 
0.927
AKU14077.1
ATP-dependent DNA helicase.
    
 0.905
AKU14616.1
Adenine-specific DNA-methyltransferase.
 
     0.862
AKU14619.1
HsdR family type I site-specific deoxyribonuclease.
 
  
 0.780
AKU14617.1
Restriction modification system DNA specificity domain-containing protein.
       0.773
AKU14314.1
Phage-related integrase.
 
     0.446
AKU12567.1
Hypothetical protein.
  
     0.429
AKU12222.1
Di-heme cytochrome c peroxidase.
  
     0.409
AKU11625.1
Metal ion efflux outer membrane protein.
  
     0.406
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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