STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002113375_04813Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_002113375_05146
Unannotated protein.
  
 0.929
GCA_002113375_00904
Unannotated protein.
 
 0.918
GCA_002113375_04812
Unannotated protein.
 
 0.890
GCA_002113375_02779
Unannotated protein.
 
 0.889
GCA_002113375_05111
Unannotated protein.
 
 0.888
GCA_002113375_03684
Unannotated protein.
 
 0.887
GCA_002113375_04198
Unannotated protein.
 
 0.887
GCA_002113375_04493
Unannotated protein.
 
 0.887
GCA_002113375_01906
Unannotated protein.
 
 0.886
GCA_002113375_03338
Unannotated protein.
 
 0.886
Your Current Organism:
Pseudomonas sp. R37
NCBI taxonomy Id: 1981685
Other names: P. sp. R37(2017), Pseudomonas sp. R37(2017)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.