STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002112745_01350Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_002112745_04662
Unannotated protein.
 
 
 0.920
GCA_002112745_01677
Unannotated protein.
 
 
 0.914
GCA_002112745_04756
Unannotated protein.
 
 
   0.913
GCA_002112745_00117
Unannotated protein.
  
 
 0.904
GCA_002112745_04743
Unannotated protein.
   
   0.903
GCA_002112745_04767
Unannotated protein.
   
 
 0.902
GCA_002112745_04778
Unannotated protein.
   
 
 0.902
GCA_002112745_04748
Unannotated protein.
  
   0.901
GCA_002112745_03939
Unannotated protein.
    
 
 0.900
GCA_002112745_04556
Unannotated protein.
  
   0.900
Your Current Organism:
Pseudomonas sp. B7
NCBI taxonomy Id: 1981712
Other names: P. sp. B7(2017), Pseudomonas sp. B7(2017)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.