STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehYPutative transport system permease protein; Code: E; COG: COG1174. (385 aa)    
Predicted Functional Partners:
yehZ
Putative transport system permease protein; Code: M; COG: COG1732.
 
 0.999
yehX
Putative ATP-binding component of a transport system; Code: E; COG: COG1125.
 
 0.997
yehW
Putative transport system permease protein; Code: E; COG: COG1174.
 
 
 
0.988
proV
Glycine betaine/L-proline transport ATP-binding protein; Code: E; COG: COG1125.
 
  
 0.713
proX
Glycine betaine/L-proline transport system permease protein; Code: E; COG: COG2113.
 
  
 0.485
bglX
beta-D-glucoside glucohydrolase; Code: G; COG: COG1472.
  
    0.466
Your Current Organism:
Shigella flexneri
NCBI taxonomy Id: 198214
Other names: S. flexneri 2a str. 301, Shigella flexneri 2a str. 301, Shigella flexneri serotype 2a str. 301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.