STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exuTTransport protein of hexuronates; Code: GEPR; COG: COG0477. (432 aa)    
Predicted Functional Partners:
exuR
Negative regulator of exu regulon, exuT, uxaAC, and uxuB; Repressor for the exu regulon that encode genes involved in hexuronate utilization. It regulates the ExuT, UxaCA and UxuRAB operons. Binds D-tagaturonate and D-fructuronate as inducers (By similarity).
  
   
 0.703
rhaT
Protein of glp regulon-like protein; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.
  
    0.501
smp
Protein Smp; Similar to Escherichia coli K12 lipoate-protein ligase A gi: 1790846 (339 aa). BLAST with identity of 97% in 338 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct; Belongs to the Smp family.
  
     0.448
yicH
Conserved hypothetical protein.
  
    0.446
yhcN
Conserved hypothetical protein.
  
     0.429
Your Current Organism:
Shigella flexneri
NCBI taxonomy Id: 198214
Other names: S. flexneri 2a str. 301, Shigella flexneri 2a str. 301, Shigella flexneri serotype 2a str. 301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.