Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN48315.1 | SHN48736.1 | SAMN02745193_00056 | SAMN02745193_00255 | Cystathionine beta-lyase. | Helix-turn-helix domain-containing protein. | 0.578 |
SHN48730.1 | SHN48733.1 | SAMN02745193_00253 | SAMN02745193_00254 | Sulfate permease, MFS superfamily. | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.990 |
SHN48730.1 | SHN48736.1 | SAMN02745193_00253 | SAMN02745193_00255 | Sulfate permease, MFS superfamily. | Helix-turn-helix domain-containing protein. | 0.609 |
SHN48730.1 | SHN48739.1 | SAMN02745193_00253 | SAMN02745193_00256 | Sulfate permease, MFS superfamily. | Hypothetical protein. | 0.423 |
SHN48733.1 | SHN48730.1 | SAMN02745193_00254 | SAMN02745193_00253 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Sulfate permease, MFS superfamily. | 0.990 |
SHN48733.1 | SHN48736.1 | SAMN02745193_00254 | SAMN02745193_00255 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Helix-turn-helix domain-containing protein. | 0.752 |
SHN48733.1 | SHN48739.1 | SAMN02745193_00254 | SAMN02745193_00256 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Hypothetical protein. | 0.510 |
SHN48736.1 | SHN48315.1 | SAMN02745193_00255 | SAMN02745193_00056 | Helix-turn-helix domain-containing protein. | Cystathionine beta-lyase. | 0.578 |
SHN48736.1 | SHN48730.1 | SAMN02745193_00255 | SAMN02745193_00253 | Helix-turn-helix domain-containing protein. | Sulfate permease, MFS superfamily. | 0.609 |
SHN48736.1 | SHN48733.1 | SAMN02745193_00255 | SAMN02745193_00254 | Helix-turn-helix domain-containing protein. | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.752 |
SHN48736.1 | SHN48739.1 | SAMN02745193_00255 | SAMN02745193_00256 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.524 |
SHN48739.1 | SHN48730.1 | SAMN02745193_00256 | SAMN02745193_00253 | Hypothetical protein. | Sulfate permease, MFS superfamily. | 0.423 |
SHN48739.1 | SHN48733.1 | SAMN02745193_00256 | SAMN02745193_00254 | Hypothetical protein. | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.510 |
SHN48739.1 | SHN48736.1 | SAMN02745193_00256 | SAMN02745193_00255 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.524 |