STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN49756.1S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase. (404 aa)    
Predicted Functional Partners:
SHN49762.1
S-adenosylmethionine-diacylgycerolhomoserine-N- methlytransferase.
 
  
 0.981
SHN64028.1
Diacylglycerol kinase catalytic domain-containing protein.
    
  0.651
SHN49746.1
Hypothetical protein.
       0.519
SHN49751.1
L-threonine ammonia-lyase.
       0.519
SHN63327.1
Protein TonB.
  
     0.497
SHN61529.1
Polysaccharide deacetylase.
  
     0.484
SHN59287.1
Protein PsiE.
  
     0.413
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.