STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN51247.1Histidine phosphotransferase ChpT. (217 aa)    
Predicted Functional Partners:
SHN57395.1
Two component transcriptional regulator, winged helix family.
  
 0.977
SHN48663.1
Signal transduction histidine kinase.
   
 0.969
SHN60404.1
Two component transcriptional regulator, winged helix family.
  
 0.918
SHN48359.1
Two component transcriptional regulator, winged helix family.
  
 0.910
SHN49418.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
   
 0.898
SHN60524.1
Multi-sensor hybrid histidine kinase.
  
  0.836
SHN50051.1
Response regulator receiver domain-containing protein.
 
  0.834
SHN51255.1
N-acetylmuramoyl-L-alanine amidase.
 
     0.821
SHN49820.1
PAS/PAC sensor signal transduction histidine kinase.
  
  0.808
SHN57936.1
Two-component system, cell cycle response regulator CpdR.
  
 0.808
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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