STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN52351.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
SHN61515.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.590
SHN62873.1
Iron complex outermembrane recepter protein.
  
     0.576
SHN59773.1
Hypothetical protein.
  
     0.510
SHN51765.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.503
SHN52423.1
TonB-dependent Receptor Plug Domain.
  
     0.498
SHN52355.1
Two-component system, LuxR family, sensor kinase FixL.
       0.488
SHN52359.1
Two component transcriptional regulator, LuxR family.
       0.488
SHN58390.1
Hypothetical protein.
  
     0.469
SHN50142.1
TonB-dependent Receptor Plug Domain.
  
     0.454
SHN57927.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.448
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.