STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN53678.1SH3-like domain-containing protein. (166 aa)    
Predicted Functional Partners:
SHN48487.1
DnaJ domain-containing protein.
  
     0.741
SHN55857.1
Hypothetical protein.
  
     0.722
SHN56921.1
Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family.
  
     0.674
SHN57264.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.674
SHN49802.1
ATP-dependent helicase/nuclease subunit B.
  
     0.652
SHN62247.1
Hypothetical protein.
  
     0.637
SHN53674.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.600
SHN62195.1
Transcriptional regulator, CarD family.
  
     0.560
SHN50730.1
Beta-barrel assembly machine subunit BamE.
  
     0.523
SHN56086.1
Protein of unknown function.
  
     0.497
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.