STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN53789.1Histidine kinase. (465 aa)    
Predicted Functional Partners:
SHN60524.1
Multi-sensor hybrid histidine kinase.
 
 
 0.923
SHN49418.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 
  0.919
SHN61636.1
PAS domain S-box-containing protein.
 
0.914
SHN48663.1
Signal transduction histidine kinase.
 
0.889
SHN56357.1
Na+/proline symporter.
 
0.880
SHN50051.1
Response regulator receiver domain-containing protein.
 
  0.862
SHN50132.1
Response regulator receiver domain-containing protein.
  
  0.856
SHN53989.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
  
 
 0.846
SHN52355.1
Two-component system, LuxR family, sensor kinase FixL.
 
0.839
SHN48359.1
Two component transcriptional regulator, winged helix family.
 
  0.832
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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