STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN54831.1Acyl-CoA dehydrogenase. (416 aa)    
Predicted Functional Partners:
SHN54824.1
Acyl-CoA dehydrogenase.
     0.983
SHN54838.1
Acetyl-CoA acetyltransferase.
 
  0.945
SHN54832.1
Hypothetical protein.
 
  
  0.926
SHN48320.1
3-hydroxypropionyl-CoA synthetase.
  
 0.899
SHN54821.1
AMP-binding enzyme C-terminal domain-containing protein.
 
 
  0.898
SHN54863.1
Acyl-CoA dehydrogenase.
     0.890
SHN54813.1
Lysophospholipase, alpha-beta hydrolase superfamily.
 
  0.848
SHN54844.1
DNA-binding transcriptional regulator, FadR family.
 
     0.833
SHN59556.1
Acyl-CoA dehydrogenase.
 
     0.800
SHN62708.1
Hypothetical protein.
 
     0.793
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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