STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN56299.1Cytochrome oxidase maturation protein, cbb3-type. (50 aa)    
Predicted Functional Partners:
SHN56318.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.969
SHN56309.1
Nitrogen fixation protein FixH.
 
  
 0.946
SHN56313.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.943
SHN56303.1
Cu2+-exporting ATPase.
 
  
 0.942
SHN56327.1
Cytochrome c oxidase cbb3-type subunit 2.
 
 
 0.903
SHN56332.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.868
SHN56295.1
Hypothetical protein.
       0.786
SHN56291.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.739
SHN56321.1
Cytochrome c oxidase cbb3-type subunit 4.
  
 
 0.535
SHN56286.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.424
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.