STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN60595.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (259 aa)    
Predicted Functional Partners:
SHN60605.1
Oxidoreductase molybdopterin binding domain-containing protein.
   
   0.815
SHN60599.1
Thiosulfate reductase cytochrome b subunit.
       0.800
SHN57483.1
Glutamate synthase (NADH) large subunit.
     
 0.768
SHN48320.1
3-hydroxypropionyl-CoA synthetase.
  
 0.732
SHN54796.1
Xylene monooxygenase electron transfer component.
   
 0.672
SHN61627.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
    
 0.639
SHN56006.1
Uncharacterized sulfatase.
   
   0.551
SHN60610.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
    0.549
SHN58218.1
[Acyl-carrier-protein] S-malonyltransferase.
   
  0.489
SHN60616.1
Hypothetical protein.
       0.487
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.