STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN61461.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
SHN61457.1
Hypothetical protein.
  
  
 0.894
SHN61453.1
Hypothetical protein.
       0.773
SHN61466.1
Hypothetical protein.
       0.686
SHN63693.1
Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
  
  
 0.504
SHN63698.1
Protease FtsH subunit HflK.
  
  
 0.504
SHN61449.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
       0.484
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.