STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN62810.1SnoaL-like domain-containing protein. (172 aa)    
Predicted Functional Partners:
SHN62800.1
Cytochrome P450.
 
    0.841
SHN62794.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.825
SHN62848.1
SnoaL-like domain-containing protein.
  
     0.774
SHN62806.1
Antibiotic biosynthesis monooxygenase.
       0.773
SHN62702.1
DUF35 OB-fold domain-containing protein, acyl-CoA-associated.
  
     0.719
SHN62789.1
Cytochrome P450.
 
    0.686
SHN62685.1
Hypothetical protein.
  
     0.665
SHN62873.1
Iron complex outermembrane recepter protein.
  
     0.630
SHN62737.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.608
SHN62782.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
  
  0.594
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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