STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN64971.1Glycosyltransferase, GT2 family. (588 aa)    
Predicted Functional Partners:
SHN64945.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.876
SHN64938.1
Capsular polysaccharide transport system permease protein.
 
  
 0.866
SHN64976.1
Polysaccharide export outer membrane protein.
 
  
 0.851
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
 0.831
SHN51287.1
Adsorption protein B.
  
 
 0.830
SHN64279.1
UDP-glucose pyrophosphorylase.
    
 0.828
SHN64920.1
Glycosyltransferase, GT2 family.
 
 
0.807
SHN49806.1
Mannose-1-phosphate guanylyltransferase.
  
 0.804
SHN61627.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
 
 0.801
SHN64900.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.797
Your Current Organism:
Porphyrobacter sanguineus
NCBI taxonomy Id: 198312
Other names: ATCC 25659, Agrobacterium sanguineum, DSM 11032, IAM 12620, ICPB 4167, IFO 15763, JCM 20691, NBRC 15763, P. sanguineus, strain A91
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