Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN49087.1 | SHN65128.1 | SAMN02745193_00272 | SAMN02745193_02827 | DNA-binding transcriptional regulator, MarR family. | Membrane protein. | 0.404 |
SHN58177.1 | SHN65128.1 | SAMN02745193_01769 | SAMN02745193_02827 | Hypothetical protein. | Membrane protein. | 0.458 |
SHN65123.1 | SHN65128.1 | SAMN02745193_02826 | SAMN02745193_02827 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | Membrane protein. | 0.832 |
SHN65123.1 | SHN65134.1 | SAMN02745193_02826 | SAMN02745193_02828 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | 0.727 |
SHN65123.1 | SHN65147.1 | SAMN02745193_02826 | SAMN02745193_02830 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | Phenazine biosynthesis protein PhzF family. | 0.422 |
SHN65123.1 | pdxH | SAMN02745193_02826 | SAMN02745193_02829 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.466 |
SHN65128.1 | SHN49087.1 | SAMN02745193_02827 | SAMN02745193_00272 | Membrane protein. | DNA-binding transcriptional regulator, MarR family. | 0.404 |
SHN65128.1 | SHN58177.1 | SAMN02745193_02827 | SAMN02745193_01769 | Membrane protein. | Hypothetical protein. | 0.458 |
SHN65128.1 | SHN65123.1 | SAMN02745193_02827 | SAMN02745193_02826 | Membrane protein. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.832 |
SHN65128.1 | SHN65134.1 | SAMN02745193_02827 | SAMN02745193_02828 | Membrane protein. | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | 0.727 |
SHN65128.1 | SHN65147.1 | SAMN02745193_02827 | SAMN02745193_02830 | Membrane protein. | Phenazine biosynthesis protein PhzF family. | 0.421 |
SHN65128.1 | pdxH | SAMN02745193_02827 | SAMN02745193_02829 | Membrane protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.434 |
SHN65128.1 | polA | SAMN02745193_02827 | SAMN02745193_01608 | Membrane protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.421 |
SHN65134.1 | SHN65123.1 | SAMN02745193_02828 | SAMN02745193_02826 | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.727 |
SHN65134.1 | SHN65128.1 | SAMN02745193_02828 | SAMN02745193_02827 | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Membrane protein. | 0.727 |
SHN65134.1 | SHN65147.1 | SAMN02745193_02828 | SAMN02745193_02830 | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Phenazine biosynthesis protein PhzF family. | 0.467 |
SHN65134.1 | pdxH | SAMN02745193_02828 | SAMN02745193_02829 | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.475 |
SHN65134.1 | polA | SAMN02745193_02828 | SAMN02745193_01608 | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.478 |
SHN65147.1 | SHN65123.1 | SAMN02745193_02830 | SAMN02745193_02826 | Phenazine biosynthesis protein PhzF family. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.422 |
SHN65147.1 | SHN65128.1 | SAMN02745193_02830 | SAMN02745193_02827 | Phenazine biosynthesis protein PhzF family. | Membrane protein. | 0.421 |
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