STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS37312.1Ribonuclease; Belongs to the UPF0761 family. (277 aa)    
Predicted Functional Partners:
AKS37310.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.871
AKS37311.1
Glycine/betaine ABC transporter substrate-binding protein.
       0.728
AKS37309.1
Hypothetical protein; Belongs to the UPF0435 family.
       0.558
AKS39631.1
Phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.474
AKS37315.1
Cation transporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.447
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
   
 0.424
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.419
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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