STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS37863.1Diguanylate cyclase. (525 aa)    
Predicted Functional Partners:
AKS39257.1
DeoR faimly transcriptional regulator.
 
 0.834
AKS38304.1
HD family phosphohydrolase.
 
 0.794
AKS37854.1
Diguanylate cyclase.
  
 0.778
AKS37523.1
Diguanylate cyclase.
 
 
0.770
AKS37549.1
Diguanylate cyclase.
 
 
0.764
AKS37871.1
Diguanylate phosphodiesterase.
 
  
 0.756
AKS38465.1
Diguanylate phosphodiesterase.
 
 
0.642
AKS37859.1
Histidine kinase.
 
 
 0.641
AKS37250.1
Phosphohydrolase.
 
 
 
 0.631
AKS37290.1
Phosphohydrolase.
 
   
 0.598
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.