STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS38741.1Thiol-disulfide oxidoreductase; Catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c. (173 aa)    
Predicted Functional Partners:
AKS38283.1
Cytochrome C biogenesis protein CcdA.
  
 0.970
AKS38740.1
Cytochrome C biogenesis protein.
 
  
 0.925
AKS38739.1
Cytochrome C biogenesis protein.
 
  
 0.909
AKS38737.1
Histidine kinase.
  
  
 0.612
AKS38742.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.598
AKS38812.1
Cytochrome C assembly protein.
 
  
 0.557
AKS38738.1
Transcriptional regulator.
  
    0.491
AKS38745.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
    0.479
AKS38743.1
Spore maturation protein.
  
    0.477
AKS38744.1
Spore maturation protein.
  
    0.473
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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