STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS38891.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
AKS38890.1
ATP-dependent helicase.
 
  
 0.933
AKS39668.1
Transcriptional regulator.
  
     0.773
AKS37152.1
Spore gernimation protein GerD.
  
     0.772
AKS37944.1
DNA-binding protein.
  
     0.772
AKS37197.1
Sporulation protein.
  
     0.770
AKS38260.1
Spore coat protein.
  
     0.767
AKS37374.1
Hypothetical protein.
  
     0.766
AKS39053.1
Membrane protein.
  
     0.763
AKS39109.1
Stage VI sporulation protein D (LysM domain).
  
     0.762
AKS37056.1
Peptide ABC transporter permease.
  
     0.752
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.