STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS38898.1Competence protein ComG; Required for transformation and DNA binding. (98 aa)    
Predicted Functional Partners:
AKS38895.1
Competence protein comGF.
  
  
 0.967
AKS38899.1
Competence protein comGB.
 
  
 0.959
AKS38900.1
Competence protein ComG.
 
  
 0.950
AKS38892.1
Hypothetical protein.
  
    0.854
AKS38897.1
Competence protein comGD.
 
     0.846
AKS39514.1
Competence protein ComF.
 
  
 0.834
AKS38896.1
Competence protein comGE.
       0.800
AKS39094.1
Type II secretion system protein F.
  
  
 0.792
AKS38894.1
Competence protein comGG.
       0.783
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.781
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.