Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKS38013.1 | AKS39111.1 | AFK25_05510 | AFK25_11100 | Malonyl CoA-ACP transacylase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.498 |
AKS38013.1 | guaA | AFK25_05510 | AFK25_01255 | Malonyl CoA-ACP transacylase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.484 |
AKS38013.1 | hemL | AFK25_05510 | AFK25_01965 | Malonyl CoA-ACP transacylase. | Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway. | 0.572 |
AKS38013.1 | hemL-2 | AFK25_05510 | AFK25_11095 | Malonyl CoA-ACP transacylase. | Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate. | 0.571 |
AKS39108.1 | AKS39109.1 | AFK25_11085 | AFK25_11090 | Aminoglycoside phosphotransferase. | Stage VI sporulation protein D (LysM domain). | 0.971 |
AKS39108.1 | AKS39111.1 | AFK25_11085 | AFK25_11100 | Aminoglycoside phosphotransferase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.597 |
AKS39108.1 | AKS39112.1 | AFK25_11085 | AFK25_11105 | Aminoglycoside phosphotransferase. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.586 |
AKS39108.1 | AKS39114.1 | AFK25_11085 | AFK25_11115 | Aminoglycoside phosphotransferase. | Cytochrome C assembly protein. | 0.544 |
AKS39108.1 | hemA | AFK25_11085 | AFK25_11120 | Aminoglycoside phosphotransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.546 |
AKS39108.1 | hemC | AFK25_11085 | AFK25_11110 | Aminoglycoside phosphotransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.596 |
AKS39108.1 | hemL-2 | AFK25_11085 | AFK25_11095 | Aminoglycoside phosphotransferase. | Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate. | 0.596 |
AKS39109.1 | AKS39108.1 | AFK25_11090 | AFK25_11085 | Stage VI sporulation protein D (LysM domain). | Aminoglycoside phosphotransferase. | 0.971 |
AKS39109.1 | AKS39111.1 | AFK25_11090 | AFK25_11100 | Stage VI sporulation protein D (LysM domain). | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.599 |
AKS39109.1 | AKS39112.1 | AFK25_11090 | AFK25_11105 | Stage VI sporulation protein D (LysM domain). | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.597 |
AKS39109.1 | AKS39114.1 | AFK25_11090 | AFK25_11115 | Stage VI sporulation protein D (LysM domain). | Cytochrome C assembly protein. | 0.561 |
AKS39109.1 | hemA | AFK25_11090 | AFK25_11120 | Stage VI sporulation protein D (LysM domain). | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.554 |
AKS39109.1 | hemC | AFK25_11090 | AFK25_11110 | Stage VI sporulation protein D (LysM domain). | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.599 |
AKS39109.1 | hemL-2 | AFK25_11090 | AFK25_11095 | Stage VI sporulation protein D (LysM domain). | Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate. | 0.599 |
AKS39111.1 | AKS38013.1 | AFK25_11100 | AFK25_05510 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Malonyl CoA-ACP transacylase. | 0.498 |
AKS39111.1 | AKS39108.1 | AFK25_11100 | AFK25_11085 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Aminoglycoside phosphotransferase. | 0.597 |
page 1 of 4