STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS39319.1Spermidine/putrescine ABC transporter ATP-binding protein. (256 aa)    
Predicted Functional Partners:
AKS39320.1
ABC transporter permease.
 
  
 0.995
AKS39318.1
Hypothetical protein.
 
  
 0.989
AKS38461.1
ABC transporter ATP-binding protein.
 
    
0.745
AKS38805.1
ABC transporter permease.
    
 0.670
AKS39317.1
Hypothetical protein.
       0.535
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.403
Your Current Organism:
Anoxybacillus gonensis
NCBI taxonomy Id: 198467
Other names: A. gonensis, Anoxybacillus gonensis Belduz et al. 2003, Anoxybacillus sp. DT3-1, Anoxybacillus sp. P39, Anoxybacillus sp. P89, NCCB 100040, NCIMB 13933, strain G2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.