STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ72176.1Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)    
Predicted Functional Partners:
OSZ70982.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.835
OSZ72080.1
ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.801
OSZ72138.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.791
OSZ72381.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.762
OSZ72733.1
Ribonuclease PH; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.736
OSZ71910.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.711
OSZ66998.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.711
OSZ67133.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.702
OSZ72282.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.663
OSZ71868.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.658
Your Current Organism:
Sphingomonas sp. IBVSS1
NCBI taxonomy Id: 1985171
Other names: S. sp. IBVSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.