STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ72500.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)    
Predicted Functional Partners:
OSZ70763.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
OSZ72812.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
OSZ72175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.578
OSZ72174.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.548
OSZ72501.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.544
OSZ72885.1
Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
OSZ69269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
OSZ71912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.514
OSZ72277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
OSZ72266.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
Your Current Organism:
Sphingomonas sp. IBVSS1
NCBI taxonomy Id: 1985171
Other names: S. sp. IBVSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.