STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ67185.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)    
Predicted Functional Partners:
OSZ72273.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.996
OSZ72258.1
DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OSZ72502.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.989
OSZ71093.1
DNA ligase (NAD(+)) LigA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.930
OSZ66998.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.902
OSZ65368.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.879
OSZ71015.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.872
OSZ72821.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.848
OSZ72289.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
OSZ69280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.834
Your Current Organism:
Sphingomonas sp. IBVSS1
NCBI taxonomy Id: 1985171
Other names: S. sp. IBVSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.