STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ66503.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
OSZ66501.1
VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
OSZ66502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.654
OSZ66915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.638
OSZ69729.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
OSZ66504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.524
OSZ69606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
OSZ69887.1
Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
OSZ69301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
OSZ69771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
OSZ68647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
Your Current Organism:
Sphingomonas sp. IBVSS2
NCBI taxonomy Id: 1985172
Other names: S. sp. IBVSS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.